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DRX176988: MinION sequencing of SAMD00180685
1 OXFORD_NANOPORE (MinION) run: 705,206 spots, 130.3M bases, 95.5Mb downloads

Submitted by: OKIMBS
Study: Direct RNA sequencing of mRNA and non-coding RNA fractions of Mesozoans and the transcriptional mode of their mitochondrial minicircular DNA
PRJDB8618 • DRP005932 • All experiments • All runs
show Abstracthide Abstract
Direct RNA-seq analysis based Oxford nanopore minION platform of Mesozoan Dicyema orientale. We also tried polyA-tailing method by E-PAP (E. coli Poly(A) Polymerase) to capture non-ployA RNAs, such as mitochondrial transcripts and non-coding RNAs. The RNA may include the RNA fractions of the host squid, Sepioteuthis lessoniana.
Sample: Dicyema orientale polyA RNA direct sequencing, basecalled with Albacore
SAMD00180685 • DRS127760 • All experiments • All runs
Organism: Dicyema orientale
Library:
Name: 20180313PolyAaori.Albacorefilter.fail
Instrument: MinION
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: Oligo-dT
Layout: SINGLE
Construction protocol: minION direct RNA sequencing
Spot descriptor:
1  forward

Runs: 1 run, 705,206 spots, 130.3M bases, 95.5Mb
Run# of Spots# of BasesSizePublished
DRR186511705,206130.3M95.5Mb2020-03-19

ID:
10384420

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